Publications

Peer-reviewed journal articles

  1. Parekh, P., Sherfey, J., Alaybeyoglu, B., & Cirit, M. (2024). Pathway‐Based Similarity Measurement to Quantify Transcriptomics Similarity Between Human Tissues and Preclinical Models. Clinical Pharmacology & Therapeutics.
  2. Rajan*, S. A. P., Sherfey*, J., Ohri, S., Nichols, L., Smith, J. T., Parekh, P., … & Cirit, M. (2023). A Novel Milli-fluidic Liver Tissue Chip with Continuous Recirculation for Predictive Pharmacokinetics Applications. The AAPS Journal, 25(6), 102. *co-first authors.
  3. Rho, Y. A., Sherfey, J., Vijayan, S. (2023). Emotional Memory Processing during REM Sleep with Implications for Post-Traumatic Stress Disorder. Journal of Neuroscience, 43(3).
  4. Hass, J., Ardid, S., Sherfey, J., Kopell, N. (2022). Constraints on persistent activity in a biologically detailed network model of the prefrontal cortex with heterogeneities. Progress in Neurobiology, 215, 102287.
  5. Sherfey, J. S., Ardid, S., Miller, E. K., Hasselmo, M. E., Kopell, N. J. (2020). Prefrontal oscillations modulate the propagation of neuronal activity required for working memory. Neurobiology of Learning and Memory, 173:107228. bioRxiv, 531574.
  6. Ardid, S., Sherfey, J. S., McCarthy, M. M., Hass, J., Pittman-Polletta, B. R., & Kopell, N. (2019). Biased competition in the absence of input bias revealed through corticostriatal computation. Proceedings of the National Academy of Sciences, 116(17), 8564-8569.
  7. Sherfey J. S., Soplata A. E., Ardid S., Roberts E. A., Stanley D. A., Pittman-Polletta B. R., & Kopell N. J. (2018). DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation. Frontiers in Neuroinformatics, 12(10).
  8. Sherfey J. S., Ardid S., Hass J., Hasselmo M., & Kopell N. J. (2018). Flexible resonance in prefrontal networks with strong feedback inhibition. PLoS Computational Biology, 14(8): e1006357.
  9. Adams*, N. E., Sherfey*, J. S., Kopell, N. J., Whittington, M. A., & LeBeau, F. E. (2017). Hetereogeneity in neuronal intrinsic properties: a possible mechanism for hub-like properties of the rat anterior cingulate cortex during network activity. eNeuro, 4(1). *contributed equally to the work.
  10. Soplata AE, McCarthy MM, Sherfey J, Lee S, Purdon PL, Brown EN, et al. (2017). Thalamocortical control of propofol phase-amplitude coupling. PLoS Computational Biology, 13(12): e1005879.
  11. Ardid, S., Sherfey, J., McCarthy, M. M., Hass, J., & Kopell, N. (2016). Unraveling action selection and inhibitory control mechanisms in a striatal microcircuit model. International Journal of Psychophysiology, (108), 18.
  12. Kovacevic, S., Azma, S., Irimia, A., Sherfey, J., Halgren, E., & Marinkovic, K. (2012). Theta oscillations are sensitive to both early and late conflict processing stages: effects of alcohol intoxication. PloS one, 7(8), e43957.
  13. Thesen, T., McDonald, C. R., Carlson, C., Doyle, W., Cash, S., Sherfey, J., … & Halgren, E. (2012). Sequential then interactive processing of letters and words in the left fusiform gyrus. Nature communications, 3, 1284.
  14. Halgren, E., Sherfey, J. S., Irimia, A., Dale A. M., & Marinkovic, K. (2011). Sequential temporo-fronto-temporal activation during monitoring of the auditory environment for temporal patterns. Human Brain Mapping 32(8).
  15. McDonald, C. R., Thesen, T., Carlson, C., Blumberg, M., Girard, H. M., Trongnetrpunya, A., Sherfey, J. S., Devinsky, O., Kuzniecky, R., Cash, S., Leonard, M. K., Hagler, D. J., Jr., Dale, A. M., & Halgren, E. (2010). Multimodal imaging of repetition priming: Using fMRI, MEG, and intracranial EEG to reveal spatiotemporal profiles of word processing. Neuroimage, 53(2):707-17.

Selected posters

  1. Sherfey J, Ardid S, Hass J, Kopell N. J., Hasselmo M. E. (2018). Prefrontal oscillations bias pathways for thought and action. 2018 Computational Neuroscience Meeting, Seattle, WA.
  1. Trent NL, Sherfey JS. (2017). Subjective Effects of Salvia Divinorum Use: A Retrospective Mixed Methods Approach. 2017 Psychedelic Science, Oakland, California.
  1. Sherfey JS. (2016). DynaSim: a Matlab toolbox for rapidly building and exploring neural models. 2016 Janelia conference on Collaborative Development of Data-Driven Models of Neural Systems, Ashburn, Virginia.
  1. Sherfey JS, Adams NE, LeBeau FEN, Kopell NJ. (2015). Modeling neuronal diversity and fast network oscillations in rat anterior cingulate cortex (ACC). 2015 Society for Neuroscience Meeting, Chicago, IL.
  1. Sherfey JS, Kopell NJ. (2014). Prefrontal brain rhythms for rule-based action. 2014 Gordon Research Conference, Newry, ME.
  1. Sherfey JS, Adams NE, Kopell NJ. (2013). Cortical rhythms and interneurons for reading working memory: a computational study of laminar DLPFC. 2013 Society for Neuroscience Meeting, San Diego, CA.
  1. Sherfey, J. S., Yazdanbakhsh, A. (2012). Fixational eye movements increase acuity in a retinal Bipolar-Amacrine-Ganglion circuit model. 2012 Society for Neuroscience Meeting, New Orleans, LA.
  1. Sherfey, J. S., Cash, S., Dehghani, N., Halgren, E. (2010). Are human cortical slow oscillations during NREM sleep traveling waves or are they synchronized across the cortex? 2010 Society for Neuroscience Meeting, San Diego, CA.

Talks

  1. Jason Sherfey. (2018). DynaSim: Neural Modeling in Matlab. INCF Neuroinformatics 2018, Montreal, QC.
  1. Jason Sherfey. (2017). Prefrontal rhythms for cognitive control. Ph.D. Defense, Boston, MA.
  1. Sherfey JS, Kopell NJ. (2016). Competition versus cooperation in the anterior cingulate cortex. 2016 Cognitive Rhythms Collaborative Retreat, Boston, MA.
  1. Sherfey JS, Kopell NJ. (2014). Cortical rhythms and interneurons for reading working memory: a computational study of laminar DLPFC. 2014 Cognitive Rhythms Collaborative Retreat, Boston, MA.
  1. Sherfey JS, Kopell NJ. (2014). Prefrontal brain rhythms for rule-based action. 2014 Gordon Research Seminar, Newry, ME.